Import dialog

Marvin JS can import all the commonly used molecule file formats.

Marvin JS handles MDL Molfiles V2000 (.mol) and ChemAxon Marvin Documents (.mrv) as input files natively, and other file types can also be imported if the appropriate web service is available.

The structure of the Import dialog

Supported import formats in Marvin JS

Natively Marvin JS supports the MRV and MDL Mol(V2000) formats. Other export formats also available via web service.

Natively supported

ChemAxon Marvin Document (MRV)

MDL Molfile (V2000)

WebService is needed

MDL RXNfile

MDL RGfile

MDL RDfile

SMILES

ChemAxon SMILES

SMARTS

ChemAxon Extended SMARTS

InChI

HTML or XML

Name

CML

MDL Molfile V3000

MDL RXNfile V3000

MDL RGfile V3000

MDL SDfile

ChemAxon Compressed Molfile

ChemAxon Compressed SDfile

CDX File Format (Available via Open file option, or Drag & Drop)

SKC File Format (Available via Open file option, or Drag & Drop)

How to import by Paste source function

Open the text based structure file with a text editor, select all, and copy the file contents to the clipboard then paste it into the input area.

Above the text field you can select the appropriate file format from a drop-down list, or you can choose the < auto recognize> option.

Finally, pressing the Import button loads the structure on the canvas.

Drag & Drop

You can also open your molecule file by choosing it in your file system, and click and dragging than dropping it onto the Marvin JS canvas.

Related pages

Import JS

Export dialog

Export JS

Cut / Copy / Paste

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