Bond Length

• Checker searches for bond lengths different than the default setting.

• Fixer :

  offers cleaning the structure by:

  • 2D clean or (clean);

  • partial clean (partialclean).

  Example :

  Bond Length Checker (bondlength)	Warning:	Fix
  		Clean (clean)
  Detect short bonds	ex_bondlength_ch	ex_bondlength_f
  Detect long bonds	ex_bondlength_ch	ex_bondlength_f
  Detect both bonds	ex_bondlength_ch	ex_bondlength_f

{primary} The current version of bond length checker examines chain bonds of 2D molecules. Partial clean is not available.

Bond length checker does not check the length of coordinate bonds and position variation bonds.